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Clustering is a critical component of single-cell RNA sequencing (scRNA-seq) data analysis and can help reveal cell types and infer cell lineages. Despite considerable successes, there are few methods tailored to investigating cluster-specific genes contributing to cell heterogeneity, which can promote biological understanding of cell heterogeneity. In this study, we propose a zero-inflated negative binomial mixture model (ZINBMM) that simultaneously achieves effective scRNA-seq data clustering and gene selection. ZINBMM conducts a systemic analysis on raw counts, accommodating both batch effects and dropout events. Simulations and the analysis of five scRNA-seq datasets demonstrate the practical applicability of ZINBMM.

 

E-healthcare has been envisaged as a major component of the infrastructure of modern healthcare, and has been developing rapidly in China. For healthcare, news media can play an important role in raising public interest and utilization of a particular service and complicating (and, perhaps clouding) debate on public health policy issues. We conducted a linguistic analysis of news reports from January 2015 to June 2021 related to E-healthcare in mainland China, using a heterogeneous graphical modeling approach. This approach can simultaneously cluster the datasets and estimate the conditional dependence relationships of keywords. It was found that there were eight phases of media coverage. The focuses and main topics of media coverage were extracted based on the network hub and module detection. The temporal patterns of media reports were found to be mostly consistent with the policy trend. Specifically, in the policy embryonic period (2015–2016), two phases were obtained, industry management was the main topic, and policy and regulation were the focuses of media coverage. In the policy development period (2017–2019), four phases were discovered. All the four main topics, namely industry development, health care, financial market, and industry management, were present. In 2017 Q3–2017 Q4, the major focuses of media coverage included social security, healthcare and reform, and others. In 2018 Q1, industry regulation and finance became the focuses. In the policy outbreak period (2020–), two phases were discovered. Financial market and industry management were the main topics. Medical insurance and healthcare for the elderly became the focuses. This analysis can offer insights into how the media responds to public policy for E-healthcare, which can be valuable for the government, public health practitioners, health care industry investors, and others. 

Abstract Studies on the conditional relationships between PM2.5 concentrations among different regions are of great interest for the joint prevention and control of air pollution. Because of seasonal changes in atmospheric conditions, spatial patterns of PM2.5 may differ throughout the year. Additionally, concentration data are both non-negative and non-Gaussian. These data features pose significant challenges to existing methods. This study proposes a heterogeneous graphical model for non-negative and non-Gaussian data via the score matching loss. The proposed method simultaneously clusters multiple datasets and estimates a graph for variables with complex properties in each cluster. Furthermore, our model involves a network that indicate similarity among datasets, and this network can have additional applications. In simulation studies, the proposed method outperforms competing alternatives in both clustering and edge identification. We also analyse the PM2.5 concentrations' spatial correlations in Taiwan's regions using data obtained in year 2019 from 67 air-quality monitoring stations. The 12 months are clustered into four groups: January–March, April, May–September and October–December, and the corresponding graphs have 153, 57, 86 and 167 edges respectively. The results show obvious seasonality, which is consistent with the meteorological literature. Geographically, the PM2.5 concentrations of north and south Taiwan regions correlate more respectively. These results can provide valuable information for developing joint air-quality control strategies.